EnhancerDB
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  3. rs77898519[chr1:17887767]
Enhancers that have rs77898519[chr1:17887767]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17883825 17906655 enh11558
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs77898519[chr1:17887767]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17887752 17887769 RXRA JASPAR yes 27101935
chr1 17887763 17887773 ZNF740 JASPAR yes 27101936
chr1 17887763 17887777 GLIS2 JASPAR yes 27101937
chr1 17887763 17887778 NR2C2 JASPAR yes 27101938
chr1 17887764 17887774 SP1 JASPAR yes 27101939
chr1 17887764 17887775 E2F4 JASPAR yes 27101940
chr1 17887766 17887775 SP1 TRANSFAC yes 27101941
chr1 17887767 17887773 SP1 TRANSFAC yes 27101942
chr1 17887767 17887777 SP1 JASPAR yes 27101943
Genes associated with rs77898519[chr1:17887767], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More