EnhancerDB
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  3. rs77947271[chr17:63019816]
Enhancers that have rs77947271[chr17:63019816]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 63011625 63027955 enh4532
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs77947271[chr17:63019816]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 63018434 63020107 P63 GTRD no Skin (Keratinocyte) 21780994
chr17 63018434 63020107 P63 GTRD no Skin (Keratinocyte) 108283291
chr17 63018591 63019876 TCF7L2 GTRD no Colon (HCT116) 21780997
chr17 63018591 63019876 TCF7L2 GTRD no Colon (HCT116) 108283294
chr17 63019015 63019982 TCF7L2 GTRD no Colon (HCT116) 21781001
chr17 63019015 63019982 TCF7L2 GTRD no Colon (HCT116) 108283298
chr17 63019156 63019852 TCF7L2 GTRD no Colon (HCT116) 21781010
chr17 63019156 63019852 TCF7L2 GTRD no Colon (HCT116) 108283307
chr17 63019795 63019816 IRF1 JASPAR yes 55340088
chr17 63019801 63019822 IRF1 JASPAR yes 55340090
chr17 63019805 63019819 STAT1 JASPAR yes 55340091
chr17 63019805 63019820 PRDM1 JASPAR yes 55340092
chr17 63019811 63019818 JUN TRANSFAC yes 55340093
chr17 63019811 63019818 SP1 TRANSFAC yes 55340094
Genes associated with rs77947271[chr17:63019816], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More