EnhancerDB
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  3. rs77980610[chr1:25035363]
Enhancers that have rs77980610[chr1:25035363]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs77980610[chr1:25035363]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25017364 25039918 ZNF274 GTRD no Blood (GM12878) 21325292
chr1 25035348 25035363 FOXP1 JASPAR yes 27521221
chr1 25035353 25035368 FOXP1 JASPAR yes 27521222
chr1 25035354 25035375 IRF1 JASPAR yes 27521223
chr1 25035355 25035370 FOXP1 JASPAR yes 27521224
chr1 25035355 25035376 IRF1 JASPAR yes 27521225
chr1 25035356 25035371 FOXP1 JASPAR yes 27521226
chr1 25035358 25035373 FOXP1 JASPAR yes 27521227
chr1 25035359 25035380 IRF1 JASPAR yes 27521228
chr1 25035360 25035375 FOXP1 JASPAR yes 27521229
chr1 25035363 25035378 PRDM1 JASPAR yes 27521230
chr1 25035363 25035378 STAT2 JASPAR yes 27521231
Genes associated with rs77980610[chr1:25035363], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More