EnhancerDB
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  3. rs780349626[chr1:53884565]
Enhancers that have rs780349626[chr1:53884565]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53871953 53884901 enh26703
Prostate (PC-3) Brain (SK-N-MC) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs780349626[chr1:53884565]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53884560 53884575 RUNX2 JASPAR yes 28930903
chr1 53884561 53884581 RREB1 JASPAR yes 28930904
chr1 53884563 53884583 RREB1 JASPAR yes 28930905
chr1 53884565 53884585 RREB1 JASPAR yes 28930906
Genes associated with rs780349626[chr1:53884565], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More