EnhancerDB
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  3. rs78059961[chr1:55025718]
Enhancers that have rs78059961[chr1:55025718]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78059961[chr1:55025718]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55025716 55025731 NR2C2 JASPAR yes 28992236
chr1 55025717 55025731 RXRB JASPAR yes 28992237
chr1 55025717 55025731 RXRG JASPAR yes 28992238
Genes associated with rs78059961[chr1:55025718], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More