EnhancerDB
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  3. rs78091472[chr1:202078391]
Enhancers that have rs78091472[chr1:202078391]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202068088 202086155 enh12535
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78091472[chr1:202078391]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202077737 202078591 TCF7L2 GTRD no Colon (HCT116) 21367406
chr1 202077737 202078591 TCF7L2 GTRD no Colon (HCT116) 107858045
chr1 202078103 202078656 ZNF143 GTRD no Epithelial (MCF-7) 21367408
chr1 202078300 202078891 ZNF274 GTRD no Bone Marrow (K562) 21367409
chr1 202078351 202078575 ZNF274 GTRD no Bone Marrow (K562) 21367410
chr1 202078373 202078394 REST JASPAR yes 34554762
Genes associated with rs78091472[chr1:202078391], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More