EnhancerDB
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  3. rs78101898[chr12:125033362]
Enhancers that have rs78101898[chr12:125033362]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125019933 125050377 enh2674
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78101898[chr12:125033362]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125031996 125033858 ZNF143 GTRD no Epithelial (MCF-7) 21581013
chr12 125031996 125033858 ZNF143 GTRD no Epithelial (MCF-7) 108068905
chr12 125032378 125033631 ZNF143 GTRD no Epithelial (MCF-7) 21581014
chr12 125032378 125033631 ZNF143 GTRD no Epithelial (MCF-7) 108068906
chr12 125032929 125033434 SOX2 GTRD no Neural Stem Cells (H9) 108068907
chr12 125033348 125033624 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21581015
chr12 125033348 125033624 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108068908
chr12 125033354 125033369 HSF1 JASPAR yes 124392549
chr12 125033355 125033368 HSF2 JASPAR yes 124392550
chr12 125033355 125033375 TP63 JASPAR yes 124392551
chr12 125033356 125033374 TP53 JASPAR yes 124392552
Genes associated with rs78101898[chr12:125033362], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More