EnhancerDB
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  3. rs78109498[chr11:128474681]
Enhancers that have rs78109498[chr11:128474681]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 128465321 128504408 enh2107
Prostate (PC-3) Brain (SK-N-SH) Blood (T-cell) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Lung (PC-9) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs78109498[chr11:128474681]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 128462194 128475726 ZNF274 GTRD no Blood (GM12878) 21522680
chr11 128466902 128475805 ZNF274 GTRD no Blood (GM12878) 21522682
chr11 128467065 128475715 ZNF274 GTRD no Blood (GM12878) 21522684
chr11 128467770 128474727 ZNF274 GTRD no Blood (GM12878) 21522719
chr11 128470667 128475707 ZNF274 GTRD no Blood (GM12878) 21522758
chr11 128470709 128475683 ZNF274 GTRD no Blood (GM12878) 21522761
chr11 128473146 128475265 STAT3 GTRD no Blood (OCI-LY7) 21522821
chr11 128474555 128474769 SOX2 GTRD no Neural Stem Cells (H9) 21522844
chr11 128474577 128475721 TEF1 GTRD no Bone (Osteoblast) 21522845
chr11 128474659 128475777 ZNF274 GTRD no Blood (GM12878) 21522846
chr11 128474680 128474692 PKNOX1 JASPAR yes 42323543
chr11 128474680 128474692 PKNOX2 JASPAR yes 42323544
chr11 128474680 128474692 TGIF1 JASPAR yes 42323545
chr11 128474680 128474692 TGIF2 JASPAR yes 42323546
chr11 128474681 128474691 MSC JASPAR yes 42323547
chr11 128474681 128474691 MYF6 JASPAR yes 42323548
Genes associated with rs78109498[chr11:128474681], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More