EnhancerDB
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  3. rs78117380[chr3:186666084]
Enhancers that have rs78117380[chr3:186666084]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 186664911 186668475 vista1210
VISTA
chr3 186665345 186714055 enh7749
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78117380[chr3:186666084]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 186666073 186666092 RFX2 JASPAR yes 8362320
chr3 186666073 186666092 RFX2 JASPAR yes 21017466
Genes associated with rs78117380[chr3:186666084], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More