EnhancerDB
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Enhancers that have rs78127028[chr1:169479804]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 169475665 169483175 enh12361
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Esophagus Astrocyte Stomach Placenta Lung (PC-9) Muscle (Myoblast) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs78127028[chr1:169479804]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 169478895 169480127 ZNF143 GTRD no Epithelial (MCF-7) 21349476
chr1 169478903 169480275 ZNF143 GTRD no Epithelial (MCF-7) 21349477
chr1 169479278 169480170 ZNF143 GTRD no Epithelial (MCF-7) 21349478
chr1 169479334 169480254 ZNF274 GTRD no Cervix (HeLa-S3) 21349479
chr1 169479373 169480181 ZNF143 GTRD no Epithelial (MCF-7) 21349480
chr1 169479550 169480161 ZNF143 GTRD no Epithelial (MCF-7) 21349481
chr1 169479680 169479931 ZNF143 GTRD no Epithelial (MCF-7) 21349482
chr1 169479715 169480108 ZNF143 GTRD no Epithelial (MCF-7) 21349483
chr1 169479796 169479806 HOXB13 JASPAR yes 33006492
chr1 169479796 169479806 HOXD13 JASPAR yes 33006493
chr1 169479802 169479812 SP1 JASPAR yes 33006494
chr1 169479803 169479807 LFA1 TRANSFAC yes 33006495
Genes associated with rs78127028[chr1:169479804], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More