EnhancerDB
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  3. rs78163699[chr1:155860026]
Enhancers that have rs78163699[chr1:155860026]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 155856385 155866134 enh12292
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs78163699[chr1:155860026]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 155858604 155860266 TEF1 GTRD no Bone (Osteoblast) 21341668
chr1 155858755 155860062 ZNF274 GTRD no Cervix (HeLa-S3) 21341677
chr1 155858789 155860043 ZBTB33 GTRD no Lung (A549) 21341681
chr1 155858797 155861096 STAT3 GTRD no Blood (OCI-LY7) 21341683
chr1 155858814 155860092 ZBTB33 GTRD no Lung (A549) 21341689
chr1 155858901 155860144 ZBTB33 GTRD no Lung (A549) 21341702
chr1 155859107 155860085 ZNF143 GTRD no Epithelial (MCF-7) 21341710
chr1 155859228 155860639 TCF7L2 GTRD no Colon (HCT116) 21341717
chr1 155859263 155860561 ZNF143 GTRD no Epithelial (MCF-7) 21341721
chr1 155859284 155860165 ZNF143 GTRD no Epithelial (MCF-7) 21341723
chr1 155859717 155860936 TCF7L2 GTRD no Colon (HCT116) 21341726
chr1 155859782 155860793 ZNF143 GTRD no Epithelial (MCF-7) 21341727
chr1 155859923 155860843 TCF7L2 GTRD no Colon (HCT116) 21341728
chr1 155860016 155860035 REST JASPAR yes 32366011
chr1 155860022 155860037 STAT1 JASPAR yes 32366012
chr1 155860023 155860639 TCF7L2 GTRD no Colon (HCT116) 21341729
chr1 155860024 155860035 STAT1 JASPAR yes 32366013
chr1 155860024 155860035 STAT3 JASPAR yes 32366014
Genes associated with rs78163699[chr1:155860026], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More