EnhancerDB
  1. Home
  2. SNP
  3. rs78173540[chr3:149115520]
Enhancers that have rs78173540[chr3:149115520]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149097815 149115835 enh21019
Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Heart
Transcript factors that have rs78173540[chr3:149115520]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149115517 149115531 FOXF2 JASPAR yes 6490777
chr3 149115520 149115532 FOXI1 JASPAR yes 6490778
Genes associated with rs78173540[chr3:149115520], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More