EnhancerDB
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  3. rs78202282[chr1:27469565]
Enhancers that have rs78202282[chr1:27469565]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27456674 27477960 enh171
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78202282[chr1:27469565]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27469545 27469566 IRF1 JASPAR yes 27681294
chr1 27469546 27469567 IRF1 JASPAR yes 27681296
chr1 27469547 27469568 IRF1 JASPAR yes 27681298
Genes associated with rs78202282[chr1:27469565], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More