EnhancerDB
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  3. rs78203027[chr16:89422078]
Enhancers that have rs78203027[chr16:89422078]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89410245 89452355 enh16906
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78203027[chr16:89422078]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89421672 89427548 ZNF274 GTRD no Blood (GM12878) 21738343
chr16 89421672 89427548 ZNF274 GTRD no Blood (GM12878) 108225805
chr16 89421672 89427548 ZNF274 GTRD no Blood (GM12878) 108225806
chr16 89421679 89427155 ZNF274 GTRD no Blood (GM12878) 21738344
chr16 89421679 89427155 ZNF274 GTRD no Blood (GM12878) 108225807
chr16 89421679 89427155 ZNF274 GTRD no Blood (GM12878) 108225808
chr16 89421738 89424072 ZNF274 GTRD no Blood (GM12878) 21738345
chr16 89421738 89424072 ZNF274 GTRD no Blood (GM12878) 108225809
chr16 89421781 89424183 ZNF274 GTRD no Blood (GM12878) 21738346
chr16 89421781 89424183 ZNF274 GTRD no Blood (GM12878) 108225810
chr16 89422035 89424275 ZNF274 GTRD no Blood (GM12878) 21738347
chr16 89422035 89424275 ZNF274 GTRD no Blood (GM12878) 108225811
chr16 89422072 89422086 POU4F1 JASPAR yes 12335494
chr16 89422072 89422087 HNF1A JASPAR yes 12335495
chr16 89422073 89422086 HNF1B JASPAR yes 12335496
chr16 89422078 89422085 NKX3-1 JASPAR yes 12335497
Genes associated with rs78203027[chr16:89422078], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More