EnhancerDB
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  3. rs78208298[chr1:205252782]
Enhancers that have rs78208298[chr1:205252782]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205243649 205259635 enh893
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Heart
Transcript factors that have rs78208298[chr1:205252782]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205252708 205253028 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21371310
chr1 205252714 205252994 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21371311
chr1 205252718 205252998 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21371312
chr1 205252771 205252783 TFAP2A JASPAR yes 34751224
chr1 205252771 205252783 TFAP2B JASPAR yes 34751225
chr1 205252771 205252783 TFAP2C JASPAR yes 34751226
chr1 205252771 205252785 EBF1 JASPAR yes 34751227
chr1 205252772 205252787 RFX5 JASPAR yes 34751228
chr1 205252778 205252788 SP1 JASPAR yes 34751229
chr1 205252779 205252800 ZNF263 JASPAR yes 34751230
Genes associated with rs78208298[chr1:205252782], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More