EnhancerDB
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  3. rs78208887[chr17:27966893]
Enhancers that have rs78208887[chr17:27966893]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27963570 27975125 enh4328
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78208887[chr17:27966893]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27966304 27966960 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108247347
chr17 27966343 27966919 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108247356
chr17 27966449 27967025 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108247374
chr17 27966462 27966925 CTCF UCSC Txn Factor no Conserved 108247377
chr17 27966535 27966905 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108247383
chr17 27966891 27966902 FOXH1 JASPAR yes 53744348
Genes associated with rs78208887[chr17:27966893], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More