EnhancerDB
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  3. rs78228615[chr17:34234732]
Enhancers that have rs78228615[chr17:34234732]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 34213485 34236135 enh17119
Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs78228615[chr17:34234732]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 34233908 34235052 SOX2 GTRD no Neural Stem Cells (H9) 21751126
chr17 34233967 34235051 SOX2 GTRD no Neural Stem Cells (H9) 21751127
chr17 34234077 34235044 SOX2 GTRD no Neural Stem Cells (H9) 21751130
chr17 34234731 34234735 YY1 TRANSFAC yes 54021604
Genes associated with rs78228615[chr17:34234732], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More