EnhancerDB
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  3. rs78233048[chr2:239869520]
Enhancers that have rs78233048[chr2:239869520]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 239857745 239879595 enh34445
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Astrocyte Bone (Osteoblast) Peripheral Blood (MM.1S) Lung (PC-9) Uterus Stomach
Transcript factors that have rs78233048[chr2:239869520]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 239869508 239869521 ZBTB18 JASPAR yes 82200387
chr2 239869509 239869521 TGIF1 JASPAR yes 82200388
chr2 239869512 239869525 DUXA JASPAR yes 82200389
chr2 239869513 239869524 PHOX2A JASPAR yes 82200390
chr2 239869516 239869526 ALX3 JASPAR yes 82200391
chr2 239869516 239869526 EMX1 JASPAR yes 82200392
chr2 239869516 239869526 HOXB2 JASPAR yes 82200393
chr2 239869516 239869526 HOXB3 JASPAR yes 82200394
chr2 239869516 239869526 MEOX2 JASPAR yes 82200395
chr2 239869516 239869526 MNX1 JASPAR yes 82200396
chr2 239869517 239869525 LMX1A JASPAR yes 82200397
chr2 239869517 239869525 LMX1B JASPAR yes 82200398
chr2 239869517 239869525 NKX6-1 JASPAR yes 82200399
chr2 239869517 239869525 NKX6-2 JASPAR yes 82200400
chr2 239869517 239869525 PDX1 JASPAR yes 82200401
chr2 239869517 239869525 VAX1 JASPAR yes 82200402
chr2 239869517 239869525 VAX2 JASPAR yes 82200403
chr2 239869517 239869525 VSX1 JASPAR yes 82200404
Genes associated with rs78233048[chr2:239869520], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More