EnhancerDB
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  3. rs78236228[chr2:99077301]
Enhancers that have rs78236228[chr2:99077301]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 99062965 99109835 enh5721
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78236228[chr2:99077301]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 99077082 99077577 RUNX3 UCSC Txn Factor no Conserved 108433274
chr2 99077286 99077307 IRF1 JASPAR yes 75656915
chr2 99077287 99078094 POLR2A UCSC Txn Factor no Conserved 108433275
chr2 99077290 99077304 STAT1 JASPAR yes 75656916
chr2 99077290 99077305 STAT2 JASPAR yes 75656917
chr2 99077290 99077308 IRF2 JASPAR yes 75656918
chr2 99077291 99077303 IRF1 JASPAR yes 75656920
Genes associated with rs78236228[chr2:99077301], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More