EnhancerDB
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  3. rs78242985[chr17:60897916]
Enhancers that have rs78242985[chr17:60897916]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60893841 60907875 enh17280
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Placenta Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs78242985[chr17:60897916]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60897737 60898082 ZNF143 GTRD no Epithelial (MCF-7) 21778168
chr17 60897839 60898169 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21778169
chr17 60897862 60898126 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21778170
chr17 60897906 60897921 HNF1A JASPAR yes 55215015
chr17 60897911 60897924 DUXA JASPAR yes 55215016
chr17 60897912 60897923 DUX4 JASPAR yes 55215017
chr17 60897912 60897923 PHOX2A JASPAR yes 55215018
chr17 60897912 60897923 PROP1 JASPAR yes 55215019
Genes associated with rs78242985[chr17:60897916], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More