EnhancerDB
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  3. rs78248647[chr1:94243983]
Enhancers that have rs78248647[chr1:94243983]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 94213125 94252475 enh499
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs78248647[chr1:94243983]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 94243973 94243983 POU6F2 JASPAR yes 30835383
chr1 94243974 94243984 EMX1 JASPAR yes 30835384
chr1 94243974 94243984 EMX2 JASPAR yes 30835385
chr1 94243974 94243984 EVX1 JASPAR yes 30835386
chr1 94243974 94243984 EVX2 JASPAR yes 30835387
chr1 94243974 94243984 GBX1 JASPAR yes 30835388
chr1 94243974 94243984 GBX2 JASPAR yes 30835389
chr1 94243974 94243984 GSX1 JASPAR yes 30835390
chr1 94243974 94243984 HOXA2 JASPAR yes 30835391
chr1 94243974 94243984 HOXB2 JASPAR yes 30835392
chr1 94243974 94243984 HOXB3 JASPAR yes 30835393
chr1 94243974 94243984 LHX2 JASPAR yes 30835394
chr1 94243974 94243984 LHX6 JASPAR yes 30835395
chr1 94243974 94243984 MEOX1 JASPAR yes 30835396
chr1 94243974 94243984 MEOX2 JASPAR yes 30835397
chr1 94243974 94243984 NOTO JASPAR yes 30835398
chr1 94243974 94243984 POU6F1 JASPAR yes 30835399
chr1 94243975 94243983 DLX6 JASPAR yes 30835400
chr1 94243975 94243983 EN1 JASPAR yes 30835401
chr1 94243975 94243983 LBX1 JASPAR yes 30835402
chr1 94243975 94243983 PAX4 JASPAR yes 30835403
chr1 94243975 94243983 PDX1 JASPAR yes 30835404
chr1 94243975 94243983 VAX1 JASPAR yes 30835405
chr1 94243975 94243983 VAX2 JASPAR yes 30835406
chr1 94243975 94243983 VSX1 JASPAR yes 30835407
chr1 94243975 94243983 VSX2 JASPAR yes 30835408
chr1 94243975 94243991 POU4F2 JASPAR yes 30835409
chr1 94243975 94243991 POU4F3 JASPAR yes 30835410
chr1 94243977 94243992 HNF1A JASPAR yes 30835411
chr1 94243978 94243991 HNF1B JASPAR yes 30835412
chr1 94243979 94243986 NKX3-1 JASPAR yes 30835413
chr1 94243980 94243995 FOXA1 JASPAR yes 30835414
Genes associated with rs78248647[chr1:94243983], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More