EnhancerDB
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  3. rs78309980[chr15:65102691]
Enhancers that have rs78309980[chr15:65102691]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 65090749 65107680 enh16235
Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Ovary Lung Blood (GM12878) Stomach Colon (HCT116) Placenta Uterus Embryonic Stem Cell Line (H1-hESC) Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs78309980[chr15:65102691]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 65100982 65102887 ZNF143 GTRD no Epithelial (MCF-7) 108145864
chr15 65101697 65102870 TCF7L2 GTRD no Colon (HCT116) 21659773
chr15 65101854 65102813 TCF7L2 GTRD no Colon (HCT116) 21659775
chr15 65101856 65102920 TCF7L2 GTRD no Colon (HCT116) 21659776
chr15 65102001 65102838 TCF7L2 GTRD no Colon (HCT116) 21659777
chr15 65102109 65102719 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21659784
chr15 65102112 65102782 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21659785
chr15 65102624 65102895 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21659801
chr15 65102686 65103322 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21659802
chr15 65102686 65103322 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108145897
Genes associated with rs78309980[chr15:65102691], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More