EnhancerDB
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  3. rs78311552[chr1:205283703]
Enhancers that have rs78311552[chr1:205283703]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205280105 205289755 enh12590
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs78311552[chr1:205283703]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205283239 205283759 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21371769
chr1 205283239 205283759 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107861979
chr1 205283340 205287011 ZNF274 GTRD no Bone Marrow (K562) 107861980
chr1 205283380 205288679 ZBTB33 GTRD no Lung (A549) 107861981
chr1 205283469 205288967 ZNF274 GTRD no Blood (GM12878) 107861982
chr1 205283512 205288832 ZNF274 GTRD no Blood (GM12878) 107861983
chr1 205283521 205288922 ZNF274 GTRD no Blood (GM12878) 107861984
chr1 205283687 205283708 ZNF263 JASPAR yes 34753973
chr1 205283703 205283724 ZNF263 JASPAR yes 34753975
Genes associated with rs78311552[chr1:205283703], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More