EnhancerDB
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  3. rs78314658[chr17:38684034]
Enhancers that have rs78314658[chr17:38684034]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78314658[chr17:38684034]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38684028 38684036 RHOXF1 JASPAR yes 54221869
chr17 38684033 38684039 TBP TRANSFAC yes 54221870
Genes associated with rs78314658[chr17:38684034], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 38443885 38459171 + CDC6 ENSG00000094804.5 38443885 224863 Heart 0.155879 15763