EnhancerDB
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  3. rs78377534[chr1:203483087]
Enhancers that have rs78377534[chr1:203483087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78377534[chr1:203483087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203482554 203483204 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369117
chr1 203482754 203483404 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369118
chr1 203482802 203484325 ZNF143 GTRD no Epithelial (MCF-7) 21369119
chr1 203482808 203484275 ZNF143 GTRD no Epithelial (MCF-7) 21369120
chr1 203482960 203483492 TCF7L2 GTRD no Colon (HCT116) 21369121
chr1 203483059 203483609 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369122
Genes associated with rs78377534[chr1:203483087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 202976514 202993976 + TMEM183A ENSG00000163444.7 202976514 489111 Spleen 0.224748 1730
chr1 204167288 204183220 - GOLT1A ENSG00000174567.7 204183220 684201 Uterus 0.284543 1750
chr1 203595689 203713209 + ATP2B4 ENSG00000058668.10 203595689 112602 Thyroid 0.228606 1741