EnhancerDB
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  3. rs78393180[chr17:42870091]
Enhancers that have rs78393180[chr17:42870091]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42867613 42875555 enh17184
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Pancreas (Panc1) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs78393180[chr17:42870091]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42870070 42870091 IRF1 JASPAR yes 54414052
chr17 42870072 42870092 RREB1 JASPAR yes 54414053
chr17 42870075 42870096 IRF1 JASPAR yes 54414056
chr17 42870077 42870097 RREB1 JASPAR yes 54414057
chr17 42870080 42870092 IRF1 JASPAR yes 54414058
chr17 42870080 42870095 FOXP1 JASPAR yes 54414059
chr17 42870080 42870101 IRF1 JASPAR yes 54414060
chr17 42870082 42870102 RREB1 JASPAR yes 54414061
chr17 42870085 42870097 IRF1 JASPAR yes 54414062
chr17 42870085 42870100 FOXP1 JASPAR yes 54414063
chr17 42870085 42870106 IRF1 JASPAR yes 54414064
chr17 42870087 42870107 RREB1 JASPAR yes 54414065
chr17 42870090 42870102 IRF1 JASPAR yes 54414066
chr17 42870090 42870105 FOXP1 JASPAR yes 54414067
chr17 42870091 42870112 IRF1 JASPAR yes 54414068
Genes associated with rs78393180[chr17:42870091], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More