EnhancerDB
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  3. rs78409804[chr2:238098682]
Enhancers that have rs78409804[chr2:238098682]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238097785 238124624 enh19388
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Lung Muscle (A673) Heart
Transcript factors that have rs78409804[chr2:238098682]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238098676 238098689 EOMES JASPAR yes 82090337
chr2 238098678 238098688 TBR1 JASPAR yes 82090338
chr2 238098678 238098689 TBX20 JASPAR yes 82090339
chr2 238098678 238098689 TBX2 JASPAR yes 82090340
chr2 238098679 238098689 TBX21 JASPAR yes 82090341
chr2 238098680 238098688 MGA JASPAR yes 82090342
chr2 238098680 238098688 TBX15 JASPAR yes 82090343
chr2 238098680 238098688 TBX1 JASPAR yes 82090344
chr2 238098680 238098688 TBX4 JASPAR yes 82090345
chr2 238098680 238098688 TBX5 JASPAR yes 82090346
Genes associated with rs78409804[chr2:238098682], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More