EnhancerDB
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  3. rs78410361[chr18:55448085]
Enhancers that have rs78410361[chr18:55448085]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55430385 55468195 enh17731
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78410361[chr18:55448085]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55447962 55448558 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108337922
chr18 55448071 55448527 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21823445
chr18 55448071 55448527 JUND UCSC Txn Factor no Conserved 108337923
chr18 55448071 55448527 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108337924
chr18 55448074 55448086 HLF JASPAR yes 110885078
chr18 55448075 55448665 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108337925
chr18 55448076 55448092 POU4F2 JASPAR yes 110885079
chr18 55448081 55448091 PAX3 JASPAR yes 110885081
chr18 55448081 55448091 PAX7 JASPAR yes 110885082
chr18 55448083 55448092 VENTX JASPAR yes 110885083
Genes associated with rs78410361[chr18:55448085], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More