EnhancerDB
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Enhancers that have rs78414796[chr1:153490586]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153476105 153501977 enh12269
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78414796[chr1:153490586]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153489346 153492091 ZNF274 GTRD no Cervix (HeLa-S3) 21339578
chr1 153489582 153491490 ZNF274 GTRD no Cervix (HeLa-S3) 21339579
chr1 153489889 153491089 ZNF274 GTRD no Cervix (HeLa-S3) 21339580
chr1 153489914 153490784 ZNF143 GTRD no Epithelial (MCF-7) 21339581
chr1 153489917 153490960 ZBTB33 GTRD no Brain (SK-N-SH) 21339582
chr1 153489938 153491235 ZBTB33 GTRD no Brain (SK-N-SH) 21339583
chr1 153489947 153491205 ZBTB33 GTRD no Brain (SK-N-SH) 21339584
chr1 153489952 153491174 ZNF274 GTRD no Cervix (HeLa-S3) 21339585
chr1 153489952 153491183 ZNF274 GTRD no Cervix (HeLa-S3) 21339586
chr1 153489957 153490891 ZNF274 GTRD no Cervix (HeLa-S3) 21339587
chr1 153489988 153491117 ZBTB33 GTRD no Brain (SK-N-SH) 21339588
chr1 153490003 153491395 TEF1 GTRD no Bone (Osteoblast) 21339589
chr1 153490005 153491200 ZBTB33 GTRD no Brain (SK-N-SH) 21339590
chr1 153490009 153491109 P63 GTRD no Skin (Keratinocyte) 21339591
chr1 153490017 153491187 ZNF274 GTRD no Cervix (HeLa-S3) 21339592
chr1 153490025 153490937 ZBTB33 GTRD no Brain (SK-N-SH) 21339593
chr1 153490047 153490884 MYOD GTRD no Muscle (Myoblast) 21339595
chr1 153490049 153491149 ZBTB33 GTRD no Brain (SK-N-SH) 21339596
chr1 153490051 153491040 ZBTB33 GTRD no Brain (SK-N-SH) 21339597
chr1 153490055 153491202 ZNF274 GTRD no Cervix (HeLa-S3) 21339598
chr1 153490066 153491194 ZNF274 GTRD no Cervix (HeLa-S3) 21339599
chr1 153490068 153491101 ZBTB33 GTRD no Brain (SK-N-SH) 21339600
chr1 153490075 153491180 ZNF274 GTRD no Cervix (HeLa-S3) 21339602
chr1 153490079 153490634 ZNF143 GTRD no Epithelial (MCF-7) 21339603
chr1 153490091 153491019 ZBTB33 GTRD no Brain (SK-N-SH) 21339605
chr1 153490091 153491077 ZBTB33 GTRD no Brain (SK-N-SH) 21339606
chr1 153490091 153491171 ZNF274 GTRD no Cervix (HeLa-S3) 21339607
chr1 153490093 153491088 ZBTB33 GTRD no Brain (SK-N-SH) 21339608
chr1 153490105 153491072 ZBTB33 GTRD no Brain (SK-N-SH) 21339609
chr1 153490107 153491131 ZNF274 GTRD no Cervix (HeLa-S3) 21339610
chr1 153490107 153491167 ZBTB33 GTRD no Brain (SK-N-SH) 21339611
chr1 153490121 153491019 ZNF274 GTRD no Cervix (HeLa-S3) 21339612
chr1 153490122 153491137 ZBTB33 GTRD no Brain (SK-N-SH) 21339613
chr1 153490130 153491157 ZNF274 GTRD no Cervix (HeLa-S3) 21339614
chr1 153490135 153491106 ZBTB33 GTRD no Brain (SK-N-SH) 21339615
chr1 153490138 153491123 ZNF274 GTRD no Bone Marrow (K562) 21339616
chr1 153490140 153491156 TCF7L2 GTRD no Colon (HCT116) 21339617
chr1 153490145 153491115 ZBTB33 GTRD no Brain (SK-N-SH) 21339618
chr1 153490151 153491075 ZBTB33 GTRD no Brain (SK-N-SH) 21339619
chr1 153490160 153490634 ZNF274 GTRD no Cervix (HeLa-S3) 21339620
chr1 153490161 153491087 ZNF274 GTRD no Cervix (HeLa-S3) 21339621
chr1 153490167 153491072 TCF7L2 GTRD no Colon (HCT116) 21339622
chr1 153490173 153490899 ZNF274 GTRD no Cervix (HeLa-S3) 21339623
chr1 153490178 153490734 ZBTB33 GTRD no Brain (SK-N-SH) 21339624
chr1 153490188 153491116 P63 GTRD no Skin (Keratinocyte) 21339625
chr1 153490193 153490990 ZBTB33 GTRD no Brain (SK-N-SH) 21339626
chr1 153490201 153491192 P63 GTRD no Skin (Keratinocyte) 21339627
chr1 153490212 153491172 ZNF274 GTRD no Bone Marrow (K562) 21339628
chr1 153490240 153490743 ZNF143 GTRD no Epithelial (MCF-7) 21339629
chr1 153490252 153491107 ZBTB33 GTRD no Brain (SK-N-SH) 21339630
chr1 153490278 153491143 ZBTB33 GTRD no Brain (SK-N-SH) 21339631
chr1 153490292 153490861 ZNF274 GTRD no Cervix (HeLa-S3) 21339632
chr1 153490295 153490650 ZNF274 GTRD no Bone Marrow (K562) 21339633
chr1 153490308 153490844 ZNF274 GTRD no Bone Marrow (K562) 21339634
chr1 153490333 153490894 ZNF274 GTRD no Cervix (HeLa-S3) 21339635
chr1 153490422 153491304 P63 GTRD no Skin (Keratinocyte) 21339636
chr1 153490474 153490795 ZNF274 GTRD no Bone Marrow (K562) 21339637
chr1 153490585 153490597 MYBL1 JASPAR yes 32256009
Genes associated with rs78414796[chr1:153490586], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More