EnhancerDB
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  3. rs78420509[chr16:85352598]
Enhancers that have rs78420509[chr16:85352598]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78420509[chr16:85352598]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85352303 85355950 ZNF143 GTRD no Epithelial (MCF-7) 21723389
chr16 85352303 85355950 ZNF143 GTRD no Epithelial (MCF-7) 108213724
chr16 85352595 85352614 CTCF JASPAR yes 12046770
Genes associated with rs78420509[chr16:85352598], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More