EnhancerDB
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  3. rs784457[chr5:78046421]
Enhancers that have rs784457[chr5:78046421]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78038905 78058872 enh8512
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs784457[chr5:78046421]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78046406 78046421 NR2C2 JASPAR yes 63621251
chr5 78046413 78046425 TFAP2A JASPAR yes 63621252
chr5 78046413 78046425 TFAP2B JASPAR yes 63621253
chr5 78046413 78046425 TFAP2C JASPAR yes 63621254
chr5 78046413 78046428 TFAP2A JASPAR yes 63621255
chr5 78046413 78046428 TFAP2C JASPAR yes 63621256
chr5 78046414 78046425 TFAP2A JASPAR yes 63621257
chr5 78046414 78046425 TFAP2B JASPAR yes 63621258
chr5 78046415 78046424 TFAP2A JASPAR yes 63621259
chr5 78046420 78046424 LFA1 TRANSFAC yes 63621260
chr5 78046421 78046432 USF2 JASPAR yes 63621261
Genes associated with rs784457[chr5:78046421], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More