EnhancerDB
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  3. rs78454905[chr17:76320511]
Enhancers that have rs78454905[chr17:76320511]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76316725 76355075 enh17407
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 76320464 76321292 vista26185
VISTA
Transcript factors that have rs78454905[chr17:76320511]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76320430 76320950 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108301974
chr17 76320474 76320643 GATA2 UCSC Txn Factor no Conserved 108301975
chr17 76320507 76320517 ZNF740 JASPAR yes 21306718
chr17 76320507 76320517 ZNF740 JASPAR yes 56147111
chr17 76320511 76320523 HES5 JASPAR yes 21306719
chr17 76320511 76320523 HES7 JASPAR yes 21306720
chr17 76320511 76320523 HES5 JASPAR yes 56147112
chr17 76320511 76320523 HES7 JASPAR yes 56147113
Genes associated with rs78454905[chr17:76320511], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More