EnhancerDB
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  3. rs78476725[chr16:85457055]
Enhancers that have rs78476725[chr16:85457055]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85446773 85473775 enh16869
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Pancreas Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs78476725[chr16:85457055]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85452507 85466841 ZNF143 GTRD no Epithelial (MCF-7) 21725378
chr16 85452507 85466841 ZNF143 GTRD no Epithelial (MCF-7) 108214476
chr16 85452507 85466841 ZNF143 GTRD no Epithelial (MCF-7) 108214477
chr16 85452649 85460292 ZNF143 GTRD no Epithelial (MCF-7) 21725385
chr16 85452649 85460292 ZNF143 GTRD no Epithelial (MCF-7) 108214478
chr16 85452649 85460292 ZNF143 GTRD no Epithelial (MCF-7) 108214479
chr16 85454868 85457486 TCF7L2 GTRD no Colon (HCT116) 21725460
chr16 85454868 85457486 TCF7L2 GTRD no Colon (HCT116) 108214481
chr16 85455014 85458001 ZNF143 GTRD no Epithelial (MCF-7) 21725461
chr16 85455014 85458001 ZNF143 GTRD no Epithelial (MCF-7) 108214482
chr16 85455982 85460115 ZNF143 GTRD no Epithelial (MCF-7) 21725474
chr16 85455982 85460115 ZNF143 GTRD no Epithelial (MCF-7) 108214489
chr16 85455982 85460115 ZNF143 GTRD no Epithelial (MCF-7) 108214490
chr16 85456030 85465681 ZNF143 GTRD no Epithelial (MCF-7) 21725475
chr16 85456030 85465681 ZNF143 GTRD no Epithelial (MCF-7) 108214491
chr16 85456030 85465681 ZNF143 GTRD no Epithelial (MCF-7) 108214492
chr16 85456131 85457970 ZNF143 GTRD no Epithelial (MCF-7) 21725477
chr16 85456131 85457970 ZNF143 GTRD no Epithelial (MCF-7) 108214495
chr16 85456173 85460386 ZNF143 GTRD no Epithelial (MCF-7) 21725479
chr16 85456173 85460386 ZNF143 GTRD no Epithelial (MCF-7) 108214497
chr16 85456173 85460386 ZNF143 GTRD no Epithelial (MCF-7) 108214498
chr16 85456329 85459541 ZNF143 GTRD no Epithelial (MCF-7) 21725487
chr16 85456329 85459541 ZNF143 GTRD no Epithelial (MCF-7) 108214519
chr16 85456329 85459541 ZNF143 GTRD no Epithelial (MCF-7) 108214520
chr16 85456620 85466869 ZNF143 GTRD no Epithelial (MCF-7) 21725493
chr16 85456620 85466869 ZNF143 GTRD no Epithelial (MCF-7) 108214547
chr16 85456740 85468327 ZNF143 GTRD no Epithelial (MCF-7) 21725494
chr16 85456740 85468327 ZNF143 GTRD no Epithelial (MCF-7) 108214548
chr16 85456791 85458268 ZNF143 GTRD no Epithelial (MCF-7) 21725495
chr16 85456847 85458137 ZNF143 GTRD no Epithelial (MCF-7) 21725496
chr16 85456863 85457853 ZNF143 GTRD no Epithelial (MCF-7) 21725497
chr16 85456904 85462731 ZNF143 GTRD no Epithelial (MCF-7) 21725498
chr16 85456904 85462731 ZNF143 GTRD no Epithelial (MCF-7) 108214549
chr16 85456914 85459738 ZNF143 GTRD no Epithelial (MCF-7) 21725499
chr16 85456914 85459738 ZNF143 GTRD no Epithelial (MCF-7) 108214550
chr16 85456956 85457778 ZNF274 GTRD no Bone Marrow (K562) 21725500
chr16 85456973 85457909 ZNF143 GTRD no Epithelial (MCF-7) 21725501
chr16 85456982 85462781 ZNF143 GTRD no Epithelial (MCF-7) 21725502
chr16 85456982 85462781 ZNF143 GTRD no Epithelial (MCF-7) 108214551
chr16 85456988 85462870 ZNF143 GTRD no Epithelial (MCF-7) 21725503
chr16 85456988 85462870 ZNF143 GTRD no Epithelial (MCF-7) 108214552
chr16 85457015 85464255 ZNF143 GTRD no Epithelial (MCF-7) 21725504
chr16 85457015 85464255 ZNF143 GTRD no Epithelial (MCF-7) 108214553
chr16 85457054 85457066 TAL1 JASPAR yes 12059426
Genes associated with rs78476725[chr16:85457055], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More