EnhancerDB
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  3. rs78478979[chr12:50959088]
Enhancers that have rs78478979[chr12:50959088]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50954380 50971535 enh2347
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Epithelial (MCF-7) Stomach Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78478979[chr12:50959088]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50959069 50959088 CTCF JASPAR yes 120844604
chr12 50959086 50959090 YY1 TRANSFAC yes 120844608
chr12 50959088 50959108 RREB1 JASPAR yes 120844609
Genes associated with rs78478979[chr12:50959088], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More