EnhancerDB
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  3. rs78504890[chr1:205715036]
Enhancers that have rs78504890[chr1:205715036]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205701495 205718195 enh897
Prostate (RWPE1) Stomach Muscle (A673) Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs78504890[chr1:205715036]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205715019 205715040 IRF1 JASPAR yes 34783654
chr1 205715021 205715036 IRF9 JASPAR yes 34783655
chr1 205715022 205715036 IRF7 JASPAR yes 34783656
chr1 205715022 205715036 IRF8 JASPAR yes 34783657
chr1 205715023 205715041 IRF2 JASPAR yes 34783658
chr1 205715024 205715036 IRF1 JASPAR yes 34783659
chr1 205715026 205715037 FOXA1 JASPAR yes 34783660
chr1 205715027 205715038 FOXB1 JASPAR yes 34783661
chr1 205715027 205715038 FOXC1 JASPAR yes 34783662
chr1 205715027 205715039 FOXC2 JASPAR yes 34783663
chr1 205715029 205715037 FOXO3 JASPAR yes 34783664
chr1 205715035 205715039 YY1 TRANSFAC yes 34783665
Genes associated with rs78504890[chr1:205715036], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More