EnhancerDB
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  3. rs78530679[chr15:39501930]
Enhancers that have rs78530679[chr15:39501930]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 39472205 39509375 enh16053
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Placenta Colon (HCT116) Uterus Thyroid Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs78530679[chr15:39501930]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 39501583 39503390 P63 GTRD no Skin (Keratinocyte) 21648261
chr15 39501583 39503489 P63 GTRD no Skin (Keratinocyte) 21648262
chr15 39501592 39502357 P63 GTRD no Skin (Keratinocyte) 21648263
chr15 39501592 39502507 P63 GTRD no Skin (Keratinocyte) 21648264
chr15 39501820 39502080 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21648265
chr15 39501825 39502115 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21648266
chr15 39501919 39501934 HNF4A JASPAR yes 22865042
chr15 39501920 39501934 NR2F1 JASPAR yes 22865043
chr15 39501920 39501935 HNF4G JASPAR yes 22865044
chr15 39501920 39501935 NR2C2 JASPAR yes 22865045
chr15 39501929 39501940 NFE2L2 JASPAR yes 22865046
Genes associated with rs78530679[chr15:39501930], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More