EnhancerDB
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  3. rs78538680[chr1:54807590]
Enhancers that have rs78538680[chr1:54807590]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54786534 54810675 enh369
Brain (SK-N-SH) Prostate (RWPE1) Stomach Muscle (A673) Uterus Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Neural Stem Cells (H9) Heart
Transcript factors that have rs78538680[chr1:54807590]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54806663 54808143 TCF7L2 GTRD no Colon (HCT116) 107804789
chr1 54806737 54808119 TCF7L2 GTRD no Colon (HCT116) 107804790
chr1 54807223 54809382 AR GTRD no Prostate (PC-3) 107804791
Genes associated with rs78538680[chr1:54807590], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More