EnhancerDB
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  3. rs78539686[chr16:69562176]
Enhancers that have rs78539686[chr16:69562176]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 69559096 69575635 enh4114
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs78539686[chr16:69562176]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 69561509 69562491 ZNF274 GTRD no Liver (HepG2) 21712218
chr16 69561534 69562391 ZNF274 GTRD no Liver (HepG2) 21712219
chr16 69561544 69562513 ZNF274 GTRD no Liver (HepG2) 21712220
chr16 69561554 69562420 ZNF274 GTRD no Liver (HepG2) 21712221
chr16 69561670 69562496 ZNF274 GTRD no Liver (HepG2) 21712222
chr16 69561746 69562520 TEF1 GTRD no Bone (Osteoblast) 21712223
chr16 69561841 69562344 ZNF274 GTRD no Liver (HepG2) 21712224
chr16 69561847 69562356 ZNF274 GTRD no Liver (HepG2) 21712225
chr16 69561862 69562365 ZNF274 GTRD no Liver (HepG2) 21712226
chr16 69561878 69562201 ZNF143 GTRD no Epithelial (MCF-7) 21712227
chr16 69561878 69562432 ZNF274 GTRD no Cervix (HeLa-S3) 21712228
chr16 69561894 69562378 ZNF274 GTRD no Bone Marrow (K562) 21712229
chr16 69561908 69562362 ZNF274 GTRD no Liver (HepG2) 21712230
chr16 69561917 69562299 ZNF274 GTRD no Liver (HepG2) 21712231
chr16 69561943 69562339 ZNF274 GTRD no Liver (HepG2) 21712232
chr16 69561946 69562324 ZNF274 GTRD no Bone Marrow (K562) 21712233
chr16 69561948 69562316 ZNF274 GTRD no Liver (HepG2) 21712234
chr16 69561956 69562437 ZNF274 GTRD no Liver (HepG2) 21712235
chr16 69561992 69562307 ZNF274 GTRD no Liver (HepG2) 21712236
chr16 69562048 69562280 ZNF143 GTRD no Epithelial (MCF-7) 21712237
Genes associated with rs78539686[chr16:69562176], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 68771128 68869451 + CDH1 ENSG00000039068.14 68771128 692725 Esophagus 0.15793 14993