EnhancerDB
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  3. rs78546884[chr1:178912118]
Enhancers that have rs78546884[chr1:178912118]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178892945 178926835 enh769
Epithelial (MCF-7) Large Intestine Ovary Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs78546884[chr1:178912118]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178911611 178912324 SOX2 GTRD no Neural Stem Cells (H9) 21352988
chr1 178912068 178912300 SOX2 GTRD no Neural Stem Cells (H9) 21352989
chr1 178912107 178912118 STAT3 JASPAR yes 33455610
chr1 178912109 178912122 HSF2 JASPAR yes 33455611
Genes associated with rs78546884[chr1:178912118], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More