EnhancerDB
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  3. rs78548580[chr2:228262455]
Enhancers that have rs78548580[chr2:228262455]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 228254625 228287055 enh19284
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78548580[chr2:228262455]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 228262454 228262465 ETV2 JASPAR yes 81518291
chr2 228262455 228262465 ERG JASPAR yes 81518292
chr2 228262455 228262465 ETS1 JASPAR yes 81518293
chr2 228262455 228262465 FLI1 JASPAR yes 81518294
chr2 228262455 228262466 FLI1 JASPAR yes 81518295
Genes associated with rs78548580[chr2:228262455], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More