EnhancerDB
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  3. rs78548606[chr1:178620525]
Enhancers that have rs78548606[chr1:178620525]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs78548606[chr1:178620525]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178620483 178621764 ZNF274 GTRD no Liver (HepG2) 21352790
chr1 178620506 178620527 ZNF263 JASPAR yes 33433639
chr1 178620524 178620538 ZIC1 JASPAR yes 33433640
chr1 178620524 178620539 ZIC3 JASPAR yes 33433641
Genes associated with rs78548606[chr1:178620525], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More