EnhancerDB
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Enhancers that have rs78564258[chr12:50925235]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78564258[chr12:50925235]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50923334 50925850 ZNF274 GTRD no Blood (GM12878) 21545030
chr12 50923334 50925850 ZNF274 GTRD no Blood (GM12878) 108031198
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 21545031
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 108031199
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 108031200
chr12 50923402 50926073 ZNF274 GTRD no Blood (GM12878) 21545033
chr12 50923402 50926073 ZNF274 GTRD no Blood (GM12878) 108031202
chr12 50923426 50925750 STAT3 GTRD no Blood (OCI-LY7) 21545034
chr12 50923426 50925750 STAT3 GTRD no Blood (OCI-LY7) 108031203
chr12 50923466 50925662 ZNF274 GTRD no Bone Marrow (K562) 21545036
chr12 50923466 50925662 ZNF274 GTRD no Bone Marrow (K562) 108031205
chr12 50923473 50925428 ZNF274 GTRD no Blood (GM12878) 21545037
chr12 50923473 50925428 ZNF274 GTRD no Blood (GM12878) 108031206
chr12 50923494 50925744 ZNF274 GTRD no Blood (GM12878) 21545038
chr12 50923494 50925744 ZNF274 GTRD no Blood (GM12878) 108031207
chr12 50923794 50925686 ZNF274 GTRD no Cervix (HeLa-S3) 21545040
chr12 50923794 50925686 ZNF274 GTRD no Cervix (HeLa-S3) 108031209
chr12 50923810 50925770 ZNF274 GTRD no Bone Marrow (K562) 21545041
chr12 50923810 50925770 ZNF274 GTRD no Bone Marrow (K562) 108031210
chr12 50923813 50925708 ZNF274 GTRD no Blood (GM12878) 21545042
chr12 50923813 50925708 ZNF274 GTRD no Blood (GM12878) 108031211
chr12 50923877 50925767 ZNF274 GTRD no Bone Marrow (K562) 21545043
chr12 50923877 50925767 ZNF274 GTRD no Bone Marrow (K562) 108031212
chr12 50923891 50925338 ZNF274 GTRD no Blood (GM12878) 21545044
chr12 50923891 50925338 ZNF274 GTRD no Blood (GM12878) 108031213
chr12 50923891 50925350 ZNF274 GTRD no Blood (GM12878) 21545045
chr12 50923891 50925350 ZNF274 GTRD no Blood (GM12878) 108031214
chr12 50923916 50925622 ZNF274 GTRD no Bone Marrow (K562) 21545046
chr12 50923916 50925622 ZNF274 GTRD no Bone Marrow (K562) 108031215
chr12 50923922 50925643 ZNF274 GTRD no Bone Marrow (K562) 21545047
chr12 50923922 50925643 ZNF274 GTRD no Bone Marrow (K562) 108031216
chr12 50923973 50925793 ZNF274 GTRD no Liver (HepG2) 21545048
chr12 50923973 50925793 ZNF274 GTRD no Liver (HepG2) 108031217
chr12 50923991 50925752 ZNF274 GTRD no Bone Marrow (K562) 21545049
chr12 50923991 50925752 ZNF274 GTRD no Bone Marrow (K562) 108031218
chr12 50924022 50925771 ZNF274 GTRD no Blood (GM12878) 21545051
chr12 50924022 50925771 ZNF274 GTRD no Blood (GM12878) 108031220
chr12 50924038 50925279 ZNF274 GTRD no Bone Marrow (K562) 21545053
chr12 50924038 50925279 ZNF274 GTRD no Bone Marrow (K562) 108031222
chr12 50924043 50925561 ZNF274 GTRD no Bone Marrow (K562) 21545055
chr12 50924043 50925561 ZNF274 GTRD no Bone Marrow (K562) 108031224
chr12 50924054 50925289 ZNF274 GTRD no Liver (HepG2) 21545057
chr12 50924054 50925289 ZNF274 GTRD no Liver (HepG2) 108031226
chr12 50924054 50925640 ZNF274 GTRD no Bone Marrow (K562) 21545058
chr12 50924054 50925640 ZNF274 GTRD no Bone Marrow (K562) 108031227
chr12 50924055 50925363 ZNF274 GTRD no Liver (HepG2) 21545059
chr12 50924055 50925363 ZNF274 GTRD no Liver (HepG2) 108031228
chr12 50924066 50925268 ZNF274 GTRD no Liver (HepG2) 21545060
chr12 50924066 50925268 ZNF274 GTRD no Liver (HepG2) 108031229
chr12 50924067 50925651 ZNF274 GTRD no Blood (GM12878) 21545061
chr12 50924067 50925651 ZNF274 GTRD no Blood (GM12878) 108031230
chr12 50924068 50925433 ZNF274 GTRD no Blood (GM12878) 21545062
chr12 50924068 50925433 ZNF274 GTRD no Blood (GM12878) 108031231
chr12 50924076 50925356 ZNF274 GTRD no Blood (GM12878) 21545063
chr12 50924076 50925356 ZNF274 GTRD no Blood (GM12878) 108031232
chr12 50924081 50925326 ZNF274 GTRD no Bone Marrow (K562) 21545065
chr12 50924081 50925326 ZNF274 GTRD no Bone Marrow (K562) 108031234
chr12 50924083 50925628 ZNF274 GTRD no Liver (HepG2) 21545066
chr12 50924083 50925628 ZNF274 GTRD no Liver (HepG2) 108031235
chr12 50924116 50925530 ZNF274 GTRD no Liver (HepG2) 21545067
chr12 50924116 50925530 ZNF274 GTRD no Liver (HepG2) 108031236
chr12 50924125 50926098 ZNF274 GTRD no Liver (HepG2) 21545069
chr12 50924125 50926098 ZNF274 GTRD no Liver (HepG2) 108031238
chr12 50924137 50925723 ZBTB33 GTRD no Brain (SK-N-SH) 108031240
chr12 50924140 50925643 ZNF274 GTRD no Bone Marrow (K562) 21545071
chr12 50924140 50925643 ZNF274 GTRD no Bone Marrow (K562) 108031241
chr12 50924147 50925533 ZNF274 GTRD no Cervix (HeLa-S3) 21545075
chr12 50924147 50925533 ZNF274 GTRD no Cervix (HeLa-S3) 108031245
chr12 50924153 50925567 ZNF143 GTRD no Epithelial (MCF-7) 21545078
chr12 50924153 50925567 ZNF143 GTRD no Epithelial (MCF-7) 108031248
chr12 50924155 50925275 ZNF274 GTRD no Liver (HepG2) 21545081
chr12 50924155 50925275 ZNF274 GTRD no Liver (HepG2) 108031251
chr12 50924158 50925367 ZNF274 GTRD no Blood (GM12878) 21545086
chr12 50924158 50925367 ZNF274 GTRD no Blood (GM12878) 108031256
chr12 50924164 50925658 ZNF274 GTRD no Bone Marrow (K562) 21545089
chr12 50924164 50925658 ZNF274 GTRD no Bone Marrow (K562) 108031259
chr12 50924165 50925457 ZBTB33 GTRD no Brain (SK-N-SH) 108031260
chr12 50924169 50925329 ZNF274 GTRD no Liver (HepG2) 21545091
chr12 50924169 50925329 ZNF274 GTRD no Liver (HepG2) 108031262
chr12 50924172 50925645 ZBTB33 GTRD no Brain (SK-N-SH) 108031265
chr12 50924183 50925285 ZNF274 GTRD no Liver (HepG2) 21545096
chr12 50924183 50925285 ZNF274 GTRD no Liver (HepG2) 108031268
chr12 50924194 50925325 ZBTB33 GTRD no Brain (SK-N-SH) 108031269
chr12 50924203 50925627 ZNF274 GTRD no Liver (HepG2) 21545098
chr12 50924203 50925627 ZNF274 GTRD no Liver (HepG2) 108031272
chr12 50924220 50925638 ZNF274 GTRD no Liver (HepG2) 21545108
chr12 50924220 50925638 ZNF274 GTRD no Liver (HepG2) 108031282
chr12 50924228 50925335 ZNF274 GTRD no Bone Marrow (K562) 21545112
chr12 50924228 50925335 ZNF274 GTRD no Bone Marrow (K562) 108031286
chr12 50924246 50925253 ZNF274 GTRD no Cervix (HeLa-S3) 21545118
chr12 50924246 50925253 ZNF274 GTRD no Cervix (HeLa-S3) 108031292
chr12 50924273 50925600 ZBTB33 GTRD no Brain (SK-N-SH) 108031300
chr12 50924287 50925236 ZNF143 GTRD no Epithelial (MCF-7) 21545129
chr12 50924287 50925236 ZNF143 GTRD no Epithelial (MCF-7) 108031304
chr12 50924288 50925261 ZBTB33 GTRD no Brain (SK-N-SH) 108031305
chr12 50924331 50925694 ZNF274 GTRD no Bone Marrow (K562) 21545131
chr12 50924331 50925694 ZNF274 GTRD no Bone Marrow (K562) 108031307
chr12 50924344 50925311 ZNF274 GTRD no Liver (HepG2) 21545132
chr12 50924344 50925311 ZNF274 GTRD no Liver (HepG2) 108031308
chr12 50924351 50925536 ZBTB33 GTRD no Brain (SK-N-SH) 108031310
chr12 50924357 50925298 ZBTB33 GTRD no Brain (SK-N-SH) 108031311
chr12 50924363 50925753 ZNF274 GTRD no Liver (HepG2) 21545134
chr12 50924363 50925753 ZNF274 GTRD no Liver (HepG2) 108031312
chr12 50924391 50925244 ZBTB33 GTRD no Lung (A549) 21545137
chr12 50924391 50925244 ZBTB33 GTRD no Lung (A549) 108031315
chr12 50924393 50925411 ZBTB33 GTRD no Brain (SK-N-SH) 108031316
chr12 50924410 50925320 ZNF274 GTRD no Cervix (HeLa-S3) 21545139
chr12 50924410 50925320 ZNF274 GTRD no Cervix (HeLa-S3) 108031318
chr12 50924439 50925639 ZBTB33 GTRD no Brain (SK-N-SH) 108031321
chr12 50924478 50925276 ZBTB33 GTRD no Lung (A549) 21545143
chr12 50924478 50925276 ZBTB33 GTRD no Lung (A549) 108031323
chr12 50924479 50925616 ZNF143 GTRD no Epithelial (MCF-7) 21545144
chr12 50924479 50925616 ZNF143 GTRD no Epithelial (MCF-7) 108031324
chr12 50924506 50925245 ZBTB33 GTRD no Brain (SK-N-SH) 108031327
chr12 50924543 50925664 ZNF274 GTRD no Bone Marrow (K562) 21545148
chr12 50924543 50925664 ZNF274 GTRD no Bone Marrow (K562) 108031329
chr12 50924566 50925453 MYOD GTRD no Muscle (Myoblast) 21545151
chr12 50924566 50925453 MYOD GTRD no Muscle (Myoblast) 108031332
chr12 50924570 50925435 ZNF274 GTRD no Bone Marrow (K562) 21545153
chr12 50924570 50925435 ZNF274 GTRD no Bone Marrow (K562) 108031334
chr12 50925231 50925242 BATF JASPAR yes 120839307
Genes associated with rs78564258[chr12:50925235], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More