EnhancerDB
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  3. rs78576219[chr3:149100029]
Enhancers that have rs78576219[chr3:149100029]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149097815 149115835 enh21019
Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Heart
chr3 149099928 149100323 vista42726
VISTA
Transcript factors that have rs78576219[chr3:149100029]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149099873 149100301 TCF12 UCSC Txn Factor no Conserved 108530640
chr3 149099874 149100290 EP300 UCSC Txn Factor no Conserved 108530641
chr3 149099894 149100243 FOSL2 UCSC Txn Factor no Conserved 108530642
chr3 149099915 149100119 RUNX3 UCSC Txn Factor no Conserved 108530643
Genes associated with rs78576219[chr3:149100029], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr3 149086809 149095652 - TM4SF1 ENSG00000169908.6 149095652 4377 Thyroid 0.0194225 4174