EnhancerDB
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  3. rs78589526[chr19:3142273]
Enhancers that have rs78589526[chr19:3142273]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3138785 3144645 enh17859
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Muscle (A673) Placenta Lung (PC-9) Pancreas (Panc1) Uterus Thymus Heart
Transcript factors that have rs78589526[chr19:3142273]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3142263 3142278 NR2C2 JASPAR yes 112114393
chr19 3142267 3142279 E2F8 JASPAR yes 112114394
chr19 3142270 3142284 PLAG1 JASPAR yes 112114395
chr19 3142273 3142277 LFA1 TRANSFAC yes 112114396
Genes associated with rs78589526[chr19:3142273], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More