EnhancerDB
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  3. rs78600716[chr17:55607899]
Enhancers that have rs78600716[chr17:55607899]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78600716[chr17:55607899]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55607895 55607904 ELK4 JASPAR yes 54965166
chr17 55607895 55607905 ELK1 JASPAR yes 54965167
chr17 55607895 55607905 ELK3 JASPAR yes 54965168
chr17 55607895 55607905 ERG JASPAR yes 54965169
chr17 55607895 55607905 ETV1 JASPAR yes 54965170
chr17 55607895 55607905 ETV5 JASPAR yes 54965171
chr17 55607895 55607905 FEV JASPAR yes 54965172
chr17 55607895 55607906 ELK4 JASPAR yes 54965173
chr17 55607897 55607903 ETS1 JASPAR yes 54965174
chr17 55607897 55607903 SPI1 JASPAR yes 54965175
Genes associated with rs78600716[chr17:55607899], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More