EnhancerDB
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  3. rs78606996[chr3:188158496]
Enhancers that have rs78606996[chr3:188158496]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 188147325 188169495 enh21191
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Astrocyte Liver Blood (OCI-LY7) Muscle (A673) Placenta Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs78606996[chr3:188158496]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 188158487 188158497 EMX1 JASPAR yes 8485559
chr3 188158487 188158497 EMX2 JASPAR yes 8485560
chr3 188158487 188158497 ESX1 JASPAR yes 8485561
chr3 188158487 188158497 GBX1 JASPAR yes 8485562
chr3 188158487 188158497 GBX2 JASPAR yes 8485563
chr3 188158487 188158497 GSX1 JASPAR yes 8485564
chr3 188158487 188158497 GSX2 JASPAR yes 8485565
chr3 188158487 188158497 HESX1 JASPAR yes 8485566
chr3 188158487 188158497 HOXA2 JASPAR yes 8485567
chr3 188158487 188158497 HOXB2 JASPAR yes 8485568
chr3 188158487 188158497 HOXB3 JASPAR yes 8485569
chr3 188158487 188158497 LBX2 JASPAR yes 8485570
chr3 188158487 188158497 LHX2 JASPAR yes 8485571
chr3 188158487 188158497 LHX6 JASPAR yes 8485572
chr3 188158487 188158497 MEOX1 JASPAR yes 8485573
chr3 188158487 188158497 MEOX2 JASPAR yes 8485574
chr3 188158487 188158497 MIXL1 JASPAR yes 8485575
chr3 188158487 188158497 MNX1 JASPAR yes 8485576
chr3 188158487 188158497 NOTO JASPAR yes 8485577
chr3 188158487 188158497 POU6F1 JASPAR yes 8485578
chr3 188158487 188158497 RAX JASPAR yes 8485579
chr3 188158488 188158496 BSX JASPAR yes 8485580
chr3 188158488 188158496 DLX6 JASPAR yes 8485581
chr3 188158488 188158496 EN1 JASPAR yes 8485582
chr3 188158488 188158496 ISX JASPAR yes 8485583
chr3 188158488 188158496 LBX1 JASPAR yes 8485584
chr3 188158488 188158496 LHX9 JASPAR yes 8485585
chr3 188158488 188158496 LMX1A JASPAR yes 8485586
chr3 188158488 188158496 LMX1B JASPAR yes 8485587
chr3 188158488 188158496 NKX6-1 JASPAR yes 8485588
chr3 188158488 188158496 NKX6-2 JASPAR yes 8485589
chr3 188158488 188158496 PAX4 JASPAR yes 8485590
chr3 188158488 188158496 PDX1 JASPAR yes 8485591
chr3 188158488 188158496 PRRX1 JASPAR yes 8485592
chr3 188158488 188158496 RAX2 JASPAR yes 8485593
chr3 188158488 188158496 SHOX JASPAR yes 8485594
chr3 188158488 188158496 UNCX JASPAR yes 8485595
chr3 188158488 188158496 VAX1 JASPAR yes 8485596
chr3 188158488 188158496 VAX2 JASPAR yes 8485597
chr3 188158488 188158496 VSX1 JASPAR yes 8485598
chr3 188158488 188158496 VSX2 JASPAR yes 8485599
chr3 188158488 188158498 POU6F2 JASPAR yes 8485600
chr3 188158489 188158502 POU3F3 JASPAR yes 8485601
Genes associated with rs78606996[chr3:188158496], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More