EnhancerDB
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  3. rs78616865[chr1:239979377]
Enhancers that have rs78616865[chr1:239979377]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 239967733 239985595 enh12821
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs78616865[chr1:239979377]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 239979371 239979380 THAP1 JASPAR yes 36539502
chr1 239979372 239979387 NR2C2 JASPAR yes 36539503
chr1 239979375 239979386 TBX20 JASPAR yes 36539504
chr1 239979376 239979386 TBX21 JASPAR yes 36539505
chr1 239979377 239979385 MGA JASPAR yes 36539506
chr1 239979377 239979385 TBX15 JASPAR yes 36539507
chr1 239979377 239979385 TBX1 JASPAR yes 36539508
chr1 239979377 239979385 TBX4 JASPAR yes 36539509
chr1 239979377 239979385 TBX5 JASPAR yes 36539510
Genes associated with rs78616865[chr1:239979377], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More