EnhancerDB
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  3. rs78617977[chr1:16504130]
Enhancers that have rs78617977[chr1:16504130]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78617977[chr1:16504130]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16504125 16504135 GSC JASPAR yes 27031633
chr1 16504126 16504134 OTX1 JASPAR yes 27031634
chr1 16504126 16504135 PITX3 JASPAR yes 27031635
Genes associated with rs78617977[chr1:16504130], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More