EnhancerDB
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  3. rs78624398[chr19:10840258]
Enhancers that have rs78624398[chr19:10840258]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10832365 10873258 enh5002
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78624398[chr19:10840258]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10840244 10840263 CTCF JASPAR yes 112432536
chr19 10840247 10840261 GLIS2 JASPAR yes 112432537
chr19 10840247 10840261 ZIC1 JASPAR yes 112432538
chr19 10840247 10840262 ZIC3 JASPAR yes 112432539
chr19 10840247 10840262 ZIC4 JASPAR yes 112432540
chr19 10840257 10840267 ELK1 JASPAR yes 112432541
chr19 10840258 10840269 ETV2 JASPAR yes 112432542
Genes associated with rs78624398[chr19:10840258], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More