EnhancerDB
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  3. rs78627796[chr1:203627255]
Enhancers that have rs78627796[chr1:203627255]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203594185 203628195 enh12562
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78627796[chr1:203627255]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203625139 203628299 ZNF274 GTRD no Bone Marrow (K562) 21369748
chr1 203625139 203628299 ZNF274 GTRD no Bone Marrow (K562) 107859243
chr1 203625167 203627433 ZNF143 GTRD no Epithelial (MCF-7) 21369750
chr1 203625167 203627433 ZNF143 GTRD no Epithelial (MCF-7) 107859245
chr1 203627239 203627260 IRF1 JASPAR yes 34652157
chr1 203627241 203627256 IRF9 JASPAR yes 34652158
chr1 203627243 203627257 STAT1 JASPAR yes 34652159
chr1 203627243 203627258 STAT2 JASPAR yes 34652160
chr1 203627244 203627256 IRF1 JASPAR yes 34652161
chr1 203627249 203627258 SRY JASPAR yes 34652162
chr1 203627252 203627268 POU4F2 JASPAR yes 34652163
chr1 203627254 203627268 FOXF2 JASPAR yes 34652164
chr1 203627254 203627268 ONECUT3 JASPAR yes 34652165
chr1 203627254 203627269 HNF1A JASPAR yes 34652166
Genes associated with rs78627796[chr1:203627255], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More